IL_5WFS_207

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUG*CA

Length

5 nucleotides

Bulged bases

5WFS|1|a|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5WFS_207 not in the Motif Atlas

Geometric match to IL_8CRE_422

Geometric discrepancy: 0.2674

The information below is about IL_8CRE_422

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97561.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

5WFS|1|a|U|367
5WFS|1|a|U|368
5WFS|1|a|G|369
*
5WFS|1|a|C|392
5WFS|1|a|A|393

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain y

Transfer RNA; tRNA

Chain z

Elongation factor Tu 2