IL_5WIS_253
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAGCC*GGCGCCGGUGAAAUAC
- Length
- 22 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Missing nucleotides: 2124, 2125, 2126, 2127, 2128, 2129, 2159, 2160, 2161, 2162, 2163, 2164, 2165, 2166, 2167, 2168, 2169, 2170, 2171, 2172, 2173, 2174
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WIS|1|2A|G|2124
5WIS|1|2A|G|2125
5WIS|1|2A|A|2126
5WIS|1|2A|G|2127
5WIS|1|2A|C|2128
5WIS|1|2A|C|2129
*
5WIS|1|2A|G|2159
5WIS|1|2A|G|2160
5WIS|1|2A|C|2161
5WIS|1|2A|G|2162
5WIS|1|2A|C|2163
5WIS|1|2A|C|2164
5WIS|1|2A|G|2165
5WIS|1|2A|G|2166
5WIS|1|2A|U|2167
5WIS|1|2A|G|2168
5WIS|1|2A|A|2169
5WIS|1|2A|A|2170
5WIS|1|2A|A|2171
5WIS|1|2A|U|2172
5WIS|1|2A|A|2173
5WIS|1|2A|C|2174
Current chains
- Chain 2A
- 23S ribosomal RNA
Nearby chains
- Chain 2y
- Transfer RNA; tRNA
Coloring options: