IL_5WIS_266
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GAA*U(PSU)C
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WIS_266 not in the Motif Atlas
- Homologous match to IL_7RQB_100
- Geometric discrepancy: 0.0519
- The information below is about IL_7RQB_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WIS|1|2A|G|2588
5WIS|1|2A|A|2589
5WIS|1|2A|A|2590
*
5WIS|1|2A|U|2604
5WIS|1|2A|PSU|2605
5WIS|1|2A|C|2606
Current chains
- Chain 2A
- 23S ribosomal RNA
Nearby chains
- Chain 2D
- 50S ribosomal protein L2
- Chain 2w
- Transfer RNA; tRNA
Coloring options: