IL_5WIT_304

3D structure

PDB id

5WIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GCGUAAAG*CGC

Length

11 nucleotides

Bulged bases

5WIT|1|2a|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIT|1|2a|G|568
5WIT|1|2a|C|569
5WIT|1|2a|G|570
5WIT|1|2a|U|571
5WIT|1|2a|A|572
5WIT|1|2a|A|573
5WIT|1|2a|A|574
5WIT|1|2a|G|575
*
5WIT|1|2a|C|880
5WIT|1|2a|G|881
5WIT|1|2a|C|882

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2e

30S ribosomal protein S5

Chain 2l

30S ribosomal protein S12

Chain 2q

30S ribosomal protein S17