IL_5WIT_345

3D structure

PDB id

5WIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CUGUGAACCC*GGGGGAG

Length

17 nucleotides

Bulged bases

5WIT|1|1A|U|2154

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIT|1|1A|C|2151
5WIT|1|1A|U|2152
5WIT|1|1A|G|2153
5WIT|1|1A|U|2154
5WIT|1|1A|G|2155
5WIT|1|1A|A|2156
5WIT|1|1A|A|2157
5WIT|1|1A|C|2158
5WIT|1|1A|C|2159
5WIT|1|1A|C|2160
*
5WIT|1|1A|G|2175
5WIT|1|1A|G|2176
5WIT|1|1A|G|2177
5WIT|1|1A|G|2178
5WIT|1|1A|G|2179
5WIT|1|1A|A|2180
5WIT|1|1A|G|2181

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains