IL_5WIT_357

3D structure

PDB id

5WIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAAGCC*GGUGACAAC

Length

16 nucleotides

Bulged bases

5WIT|1|2A|C|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIT|1|2A|G|1526
5WIT|1|2A|G|1527
5WIT|1|2A|A|1528
5WIT|1|2A|A|1528|||A
5WIT|1|2A|G|1529
5WIT|1|2A|C|1530
5WIT|1|2A|C|1531
*
5WIT|1|2A|G|1538
5WIT|1|2A|G|1539
5WIT|1|2A|U|1540
5WIT|1|2A|G|1541
5WIT|1|2A|A|1542
5WIT|1|2A|C|1543
5WIT|1|2A|A|1544
5WIT|1|2A|A|1545
5WIT|1|2A|C|1546

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains