IL_5WLC_013
3D structure
- PDB id
- 5WLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complete structure of the small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UG*UAA
- Length
- 5 nucleotides
- Bulged bases
- 5WLC|1|L0|A|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WLC_013 not in the Motif Atlas
- Geometric match to IL_1JZV_002
- Geometric discrepancy: 0.2944
- The information below is about IL_1JZV_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
5WLC|1|L0|U|340
5WLC|1|L0|G|341
*
5WLC|1|L0|U|384
5WLC|1|L0|A|385
5WLC|1|L0|A|386
Current chains
- Chain L0
- 5' ETS
Nearby chains
- Chain LW
- Utp7
- Chain LZ
- Imp3
- Chain NE
- Faf1
- Chain SS
- Utp14
Coloring options: