IL_5WLC_084

3D structure

PDB id

5WLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACCAC*GUCCCU

Length

11 nucleotides

Bulged bases

5WLC|1|L1|C|1158, 5WLC|1|L1|C|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WLC|1|L1|A|1157
5WLC|1|L1|C|1158
5WLC|1|L1|C|1159
5WLC|1|L1|A|1160
5WLC|1|L1|C|1161
*
5WLC|1|L1|G|1616
5WLC|1|L1|U|1617
5WLC|1|L1|C|1618
5WLC|1|L1|C|1619
5WLC|1|L1|C|1620
5WLC|1|L1|U|1621

Current chains

Chain L1

18S pre-rRNA

Nearby chains

Chain L5

rpS5_uS7

Chain LC

rpS16_uS9

Chain LG

rpS28_eS28

Chain LO

Utp1

Chain LQ

Utp12

Chain SM

Imp4

Chain ST

Nop14