IL_5WNR_059
3D structure
- PDB id
- 5WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAGC*GUGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WNR_059 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.3388
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
5WNR|1|A|G|1416
5WNR|1|A|G|1417
5WNR|1|A|A|1418
5WNR|1|A|G|1419
5WNR|1|A|C|1420
*
5WNR|1|A|G|1480
5WNR|1|A|U|1481
5WNR|1|A|G|1482
5WNR|1|A|A|1483
5WNR|1|A|C|1484
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
Coloring options: