IL_5WNT_056
3D structure
- PDB id
- 5WNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- G(4OC)C(5MC)G*CG(UR3)AAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC, 5MC, UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5WNT_056 not in the Motif Atlas
- Homologous match to IL_4LFB_057
- Geometric discrepancy: 0.049
- The information below is about IL_4LFB_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WNT|1|A|G|1401
5WNT|1|A|4OC|1402
5WNT|1|A|C|1403
5WNT|1|A|5MC|1404
5WNT|1|A|G|1405
*
5WNT|1|A|C|1496
5WNT|1|A|G|1497
5WNT|1|A|UR3|1498
5WNT|1|A|A|1499
5WNT|1|A|A|1500
5WNT|1|A|C|1501
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain a
- RNA (5'-R(*(A2M)P*AP*AP*UP*U)-3')
Coloring options: