IL_5WNU_048

3D structure

PDB id

5WNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GCCAGC*GGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WNU|1|A|G|1127
5WNU|1|A|C|1128
5WNU|1|A|C|1129
5WNU|1|A|A|1130
5WNU|1|A|G|1131
5WNU|1|A|C|1132
*
5WNU|1|A|G|1142
5WNU|1|A|G|1143
5WNU|1|A|G|1144
5WNU|1|A|C|1145

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10