IL_5WSG_003
3D structure
- PDB id
- 5WSG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CA*UUAG
- Length
- 6 nucleotides
- Bulged bases
- 5WSG|1|L|U|24, 5WSG|1|L|A|25
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WSG|1|E|C|58
5WSG|1|E|A|59
*
5WSG|1|L|U|23
5WSG|1|L|U|24
5WSG|1|L|A|25
5WSG|1|L|G|26
Current chains
- Chain E
- Saccharomyces cerevisiae S288c SNR6 snRNA
- Chain L
- RNA (91-MER)
Nearby chains
- Chain A
- Pre-mRNA-splicing factor 8
- Chain B
- 5'-exon
- Chain P
- Pre-mRNA-processing protein 45
- Chain b
- 3'-exon-intron
- Chain c
- Pre-mRNA-splicing factor CEF1,Pre-mRNA-splicing factor CEF1,Cef1,Pre-mRNA-splicing factor CEF1
Coloring options: