IL_5WSG_009

3D structure

PDB id

5WSG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UG*CUA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WSG|1|L|U|42
5WSG|1|L|G|43
*
5WSG|1|M|C|491
5WSG|1|M|U|492
5WSG|1|M|A|493

Current chains

Chain L

RNA (91-MER)

Chain M

3'-intron-lariat

Nearby chains

Chain c

Pre-mRNA-splicing factor CEF1,Pre-mRNA-splicing factor CEF1,Cef1,Pre-mRNA-splicing factor CEF1

Chain n

Pre-mRNA-processing factor 17