IL_5WTI_003

3D structure

PDB id

5WTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the CRISPR-associated protein in complex with crRNA and DNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.68 Å

Loop

Sequence

CUAUAAGUGCUGCA*UAG

Length

17 nucleotides

Bulged bases

5WTI|1|B|U|39, 5WTI|1|B|A|41, 5WTI|1|B|C|48

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61300.1

Basepair signature

cWW-cSS-tSS-L-tHW-cWW-L-R-L-R-L-R

Number of instances in this motif group

1

Unit IDs

5WTI|1|B|C|36
5WTI|1|B|U|37
5WTI|1|B|A|38
5WTI|1|B|U|39
5WTI|1|B|A|40
5WTI|1|B|A|41
5WTI|1|B|G|42
5WTI|1|B|U|43
5WTI|1|B|G|44
5WTI|1|B|C|45
5WTI|1|B|U|46
5WTI|1|B|G|47
5WTI|1|B|C|48
5WTI|1|B|A|49
*
5WTI|1|B|U|67
5WTI|1|B|A|68
5WTI|1|B|G|71

Current chains

Chain B

RNA (123-MER)

Nearby chains

Chain Z

CRISPR-associated protein