IL_5X2G_001
3D structure
- PDB id
- 5X2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Campylobacter jejuni Cas9 in complex with sgRNA and target DNA (AGAAACC PAM)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAAU*ATTTC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5X2G|1|B|G|2
5X2G|1|B|A|3
5X2G|1|B|A|4
5X2G|1|B|A|5
5X2G|1|B|U|6
*
5X2G|1|C|DA|15
5X2G|1|C|DT|16
5X2G|1|C|DT|17
5X2G|1|C|DT|18
5X2G|1|C|DC|19
Current chains
- Chain B
- sgRNA
- Chain C
- Target DNA strand
Nearby chains
- Chain A
- CRISPR-associated endonuclease Cas9
Coloring options: