IL_5XYU_017

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CAGC*GCAGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|C|440
5XYU|1|A|A|441
5XYU|1|A|G|442
5XYU|1|A|C|443
*
5XYU|1|A|G|471
5XYU|1|A|C|472
5XYU|1|A|A|473
5XYU|1|A|G|474
5XYU|1|A|A|475
5XYU|1|A|A|476
5XYU|1|A|G|477

Current chains

Chain A

16S RNA

Nearby chains

Chain D

30S ribosomal protein S4