IL_5XYU_060

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GGGAUAAG*UCUAAUACC

Length

17 nucleotides

Bulged bases

5XYU|1|A|U|170

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|G|143
5XYU|1|A|G|144
5XYU|1|A|G|145
5XYU|1|A|A|146
5XYU|1|A|U|147
5XYU|1|A|A|148
5XYU|1|A|A|149
5XYU|1|A|G|150
*
5XYU|1|A|U|165
5XYU|1|A|C|166
5XYU|1|A|U|167
5XYU|1|A|A|168
5XYU|1|A|A|169
5XYU|1|A|U|170
5XYU|1|A|A|171
5XYU|1|A|C|172
5XYU|1|A|C|173

Current chains

Chain A

16S RNA

Nearby chains

Chain T

30S ribosomal protein S20