IL_5XYU_063

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GGAAUUCC*GGAGGAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|G|653
5XYU|1|A|G|654
5XYU|1|A|A|655
5XYU|1|A|A|656
5XYU|1|A|U|657
5XYU|1|A|U|658
5XYU|1|A|C|659
5XYU|1|A|C|660
*
5XYU|1|A|G|690
5XYU|1|A|G|691
5XYU|1|A|A|692
5XYU|1|A|G|693
5XYU|1|A|G|694
5XYU|1|A|A|695
5XYU|1|A|A|696
5XYU|1|A|C|697

Current chains

Chain A

16S RNA

Nearby chains

Chain F

30S ribosomal protein S6

Chain K

30S ribosomal protein S11

Chain R

30S ribosomal protein S18 2