IL_5XYU_066

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GGC*GUCAUC

Length

9 nucleotides

Bulged bases

5XYU|1|A|C|1181, 5XYU|1|A|A|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|G|1037
5XYU|1|A|G|1038
5XYU|1|A|C|1039
*
5XYU|1|A|G|1179
5XYU|1|A|U|1180
5XYU|1|A|C|1181
5XYU|1|A|A|1182
5XYU|1|A|U|1183
5XYU|1|A|C|1184

Current chains

Chain A

16S RNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14 type Z