IL_5XYU_074

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CGGAUCGGGG*CCCCGUGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|C|1285
5XYU|1|A|G|1286
5XYU|1|A|G|1287
5XYU|1|A|A|1288
5XYU|1|A|U|1289
5XYU|1|A|C|1290
5XYU|1|A|G|1291
5XYU|1|A|G|1292
5XYU|1|A|G|1293
5XYU|1|A|G|1294
*
5XYU|1|A|C|1307
5XYU|1|A|C|1308
5XYU|1|A|C|1309
5XYU|1|A|C|1310
5XYU|1|A|G|1311
5XYU|1|A|U|1312
5XYU|1|A|G|1313
5XYU|1|A|A|1314
5XYU|1|A|A|1315
5XYU|1|A|G|1316

Current chains

Chain A

16S RNA

Nearby chains

Chain M

30S ribosomal protein S13

Chain S

30S ribosomal protein S19