IL_5Y7M_002
3D structure
- PDB id
- 5Y7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of PhoRpp38 bound to a K-turn in P12.1 helix
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAA*UGAAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5Y7M_002 not in the Motif Atlas
- Geometric match to IL_5Y7M_006
- Geometric discrepancy: 0.1127
- The information below is about IL_5Y7M_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47108.1
- Basepair signature
- cWW-L-R-L-tHH-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
5Y7M|1|B|U|8
5Y7M|1|B|U|9
5Y7M|1|B|A|10
5Y7M|1|B|A|11
*
5Y7M|1|B|U|39
5Y7M|1|B|G|40
5Y7M|1|B|A|41
5Y7M|1|B|A|42
5Y7M|1|B|A|43
5Y7M|1|B|G|44
Current chains
- Chain B
- RNA (52-MER)
Nearby chains
- Chain C
- 50S ribosomal protein L7Ae
Coloring options: