IL_5YZG_002
3D structure
- PDB id
- 5YZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AGAUCG*CGU
- Length
- 9 nucleotides
- Bulged bases
- 5YZG|1|B|A|21, 5YZG|1|B|U|22
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5YZG|1|B|A|19
5YZG|1|B|G|20
5YZG|1|B|A|21
5YZG|1|B|U|22
5YZG|1|B|C|23
5YZG|1|B|G|24
*
5YZG|1|B|C|56
5YZG|1|B|G|57
5YZG|1|B|U|58
Current chains
- Chain B
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain C
- 116 kDa U5 small nuclear ribonucleoprotein component
- Chain P
- Spliceosome-associated protein CWC15 homolog
Coloring options: