IL_5YZG_012
3D structure
- PDB id
- 5YZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UUAUCC*GUGUA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5YZG|1|G|U|142
5YZG|1|G|U|143
5YZG|1|G|A|144
5YZG|1|G|U|145
5YZG|1|G|C|146
5YZG|1|G|C|147
*
5YZG|1|H|G|31
5YZG|1|H|U|32
5YZG|1|H|G|33
5YZG|1|H|U|34
5YZG|1|H|A|35
Current chains
- Chain G
- Pre-mRNA
- Chain H
- U2 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain B
- U5 spliceosomal RNA; U5 snRNA
- Chain F
- U6 spliceosomal RNA; U6 snRNA
- Chain X
- Pre-mRNA-splicing factor CWC25 homolog
- Chain Y
- Coiled-coil domain-containing protein 94
- Chain y
- Pre-mRNA-splicing factor ISY1 homolog
Coloring options: