IL_5ZEP_120

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGC*GGAAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZEP_120 not in the Motif Atlas

Geometric match to IL_2OEU_001

Geometric discrepancy: 0.3452

The information below is about IL_2OEU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46387.3

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

5ZEP|1|B|C|29
5ZEP|1|B|G|30
5ZEP|1|B|C|31
*
5ZEP|1|B|G|51
5ZEP|1|B|G|52
5ZEP|1|B|A|53
5ZEP|1|B|A|54
5ZEP|1|B|G|55

Current chains

Chain B

5S rRNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain P

50S ribosomal protein L18