IL_5ZEP_150
3D structure
- PDB id
- 5ZEP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis hibernating state 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAAAAC*GCGUG
- Length
- 12 nucleotides
- Bulged bases
- 5ZEP|1|a|U|612
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZEP_150 not in the Motif Atlas
- Geometric match to IL_8C3A_433
- Geometric discrepancy: 0.2886
- The information below is about IL_8C3A_433
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83023.1
- Basepair signature
- cWW-R-L-R-L-R-L-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
5ZEP|1|a|U|585
5ZEP|1|a|G|586
5ZEP|1|a|A|587
5ZEP|1|a|A|588
5ZEP|1|a|A|589
5ZEP|1|a|A|590
5ZEP|1|a|C|591
*
5ZEP|1|a|G|609
5ZEP|1|a|C|610
5ZEP|1|a|G|611
5ZEP|1|a|U|612
5ZEP|1|a|G|613
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
Coloring options: