IL_5ZEP_160

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

5ZEP|1|a|G|908

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5ZEP_160 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0848

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

5ZEP|1|a|G|907
5ZEP|1|a|G|908
5ZEP|1|a|G|909
*
5ZEP|1|a|U|1373
5ZEP|1|a|U|1374

Current chains

Chain a

16S rRNA

Nearby chains

Chain x

Ribosome hibernation promoting factor