IL_5ZET_032
3D structure
- PDB id
- 5ZET (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 5ZET|1|A|U|981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZET_032 not in the Motif Atlas
- Homologous match to IL_7RQB_029
- Geometric discrepancy: 0.1468
- The information below is about IL_7RQB_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.1
- Basepair signature
- cWW-tSW-cWS-cSH-tWH-R-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
5ZET|1|A|G|979
5ZET|1|A|C|980
5ZET|1|A|U|981
5ZET|1|A|A|982
5ZET|1|A|C|983
5ZET|1|A|U|984
*
5ZET|1|A|A|1024
5ZET|1|A|A|1025
5ZET|1|A|A|1026
5ZET|1|A|C|1027
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- 50S ribosomal protein L16
Coloring options: