IL_5ZET_102
3D structure
- PDB id
- 5ZET (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis P/P state 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZET_102 not in the Motif Atlas
- Homologous match to IL_4WF9_093
- Geometric discrepancy: 0.1472
- The information below is about IL_4WF9_093
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
5ZET|1|A|C|2690
5ZET|1|A|C|2691
5ZET|1|A|A|2692
5ZET|1|A|A|2693
5ZET|1|A|G|2694
*
5ZET|1|A|C|2704
5ZET|1|A|G|2705
5ZET|1|A|A|2706
5ZET|1|A|C|2707
5ZET|1|A|G|2708
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L36
- Chain N
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L25
Coloring options: