IL_5ZWO_009
3D structure
- PDB id
- 5ZWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AAC*GU
- Length
- 5 nucleotides
- Bulged bases
- 5ZWO|1|G|A|501
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ZWO_009 not in the Motif Atlas
- Geometric match to IL_5J7L_049
- Geometric discrepancy: 0.3792
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
5ZWO|1|G|A|500
5ZWO|1|G|A|501
5ZWO|1|G|C|502
*
5ZWO|1|H|G|34
5ZWO|1|H|U|35
Current chains
- Chain G
- Pre-mRNA
- Chain H
- U2 snRNA
Nearby chains
- Chain 1
- U2 snRNP component HSH155
- Chain 5
- Pre-mRNA-splicing factor RDS3
- Chain 6
- RDS3 complex subunit 10
Coloring options: