IL_5ZWO_013

3D structure

PDB id

5ZWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUCGG*UG

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZWO|1|H|C|1103
5ZWO|1|H|U|1104
5ZWO|1|H|C|1105
5ZWO|1|H|G|1106
5ZWO|1|H|G|1115
*
5ZWO|1|H|U|1130
5ZWO|1|H|G|1138

Current chains

Chain H

U2 snRNA

Nearby chains

Chain l

Small nuclear ribonucleoprotein Sm D3

Chain p

U2 small nuclear ribonucleoprotein B''