IL_6AGB_004

3D structure

PDB id

6AGB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of yeast Ribonuclease P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.48 Å

Loop

Sequence

AAGAAAUAUA*UCU

Length

13 nucleotides

Bulged bases

6AGB|1|A|G|166, 6AGB|1|A|A|167, 6AGB|1|A|A|168, 6AGB|1|A|A|169, 6AGB|1|A|U|170, 6AGB|1|A|A|171, 6AGB|1|A|U|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AGB|1|A|A|164
6AGB|1|A|A|165
6AGB|1|A|G|166
6AGB|1|A|A|167
6AGB|1|A|A|168
6AGB|1|A|A|169
6AGB|1|A|U|170
6AGB|1|A|A|171
6AGB|1|A|U|172
6AGB|1|A|A|173
*
6AGB|1|A|U|186
6AGB|1|A|C|187
6AGB|1|A|U|188

Current chains

Chain A

Ribonuclease P RNA

Nearby chains

Chain B

Ribonucleases P/MRP protein subunit POP1

Chain D

RNases MRP/P 32.9 kDa subunit