IL_6AH0_005

3D structure

PDB id

6AH0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CCC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6AH0_005 not in the Motif Atlas

Geometric match to IL_7A0S_031

Geometric discrepancy: 0.1856

The information below is about IL_7A0S_031

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

6AH0|1|F|C|61
6AH0|1|F|C|62
6AH0|1|F|C|63
*
6AH0|1|I|G|12
6AH0|1|I|U|13
6AH0|1|I|G|14

Current chains

Chain F

U6snRNA

Chain I

U4snRNA

Nearby chains