IL_6AH0_006
3D structure
- PDB id
- 6AH0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- GAU*AGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AH0_006 not in the Motif Atlas
- Geometric match to IL_5ED1_002
- Geometric discrepancy: 0.1308
- The information below is about IL_5ED1_002
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
6AH0|1|F|G|72
6AH0|1|F|A|73
6AH0|1|F|U|74
*
6AH0|1|I|A|1
6AH0|1|I|G|2
6AH0|1|I|C|3
Current chains
- Chain F
- U6snRNA
- Chain I
- U4snRNA
Nearby chains
- Chain J
- U4/U6 small nuclear ribonucleoprotein Prp3
- Chain M
- NHP2-like protein 1
Coloring options: