IL_6AHD_015
3D structure
- PDB id
- 6AHD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Cryo-EM Structure of Human Pre-catalytic Spliceosome (B complex) at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUGGU*ACAACUCUG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AHD|1|B|C|6
6AHD|1|B|U|7
6AHD|1|B|G|8
6AHD|1|B|G|9
6AHD|1|B|U|10
*
6AHD|1|B|A|67
6AHD|1|B|C|68
6AHD|1|B|A|69
6AHD|1|B|A|70
6AHD|1|B|C|71
6AHD|1|B|U|72
6AHD|1|B|C|73
6AHD|1|B|U|74
6AHD|1|B|G|75
Current chains
- Chain B
- U5snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain C
- 116 kDa U5 small nuclear ribonucleoprotein component
- Chain E
- U5 small nuclear ribonucleoprotein 40 kDa protein
Coloring options: