IL_6BOK_065
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GGGAG*CGUGGAUC
- Length
- 13 nucleotides
- Bulged bases
- 6BOK|1|B|G|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_065 not in the Motif Atlas
- Homologous match to IL_7RQB_004
- Geometric discrepancy: 0.0813
- The information below is about IL_7RQB_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_45067.2
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-cWW-L
- Number of instances in this motif group
- 18
Unit IDs
6BOK|1|B|G|81
6BOK|1|B|G|82
6BOK|1|B|G|83
6BOK|1|B|A|84
6BOK|1|B|G|85
*
6BOK|1|B|C|97
6BOK|1|B|G|98
6BOK|1|B|U|99
6BOK|1|B|G|101
6BOK|1|B|G|102
6BOK|1|B|A|103
6BOK|1|B|U|104
6BOK|1|B|C|105
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain V
- 50S ribosomal protein L24
- Chain Z
- 50S ribosomal protein L29
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