IL_6BOK_146
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_146 not in the Motif Atlas
- Homologous match to IL_7RQB_089
- Geometric discrepancy: 0.0741
- The information below is about IL_7RQB_089
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.10
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 33
Unit IDs
6BOK|1|B|C|2350
6BOK|1|B|G|2351
6BOK|1|B|A|2352
6BOK|1|B|G|2353
*
6BOK|1|B|C|2364
6BOK|1|B|G|2365
6BOK|1|B|A|2366
6BOK|1|B|G|2367
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain FA
- 50S ribosomal protein L35
- Chain X
- 50S ribosomal protein L27
Coloring options: