IL_6BOK_164
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GAUAAC*GGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 6BOK|1|B|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_164 not in the Motif Atlas
- Homologous match to IL_7RQB_107
- Geometric discrepancy: 0.0806
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6BOK|1|B|G|2737
6BOK|1|B|A|2738
6BOK|1|B|U|2739
6BOK|1|B|A|2740
6BOK|1|B|A|2741
6BOK|1|B|C|2742
*
6BOK|1|B|G|2762
6BOK|1|B|G|2763
6BOK|1|B|A|2764
6BOK|1|B|A|2765
6BOK|1|B|G|2766
6BOK|1|B|C|2767
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain GA
- 50S ribosomal protein L36
- Chain I
- 50S ribosomal protein L6
- Chain K
- 50S ribosomal protein L13
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