IL_6BOK_363
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- G(4OC)C(5MC)*G(UR3)AAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC, 5MC, UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BOK_363 not in the Motif Atlas
- Homologous match to IL_4LFB_068
- Geometric discrepancy: 0.1011
- The information below is about IL_4LFB_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25873.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6BOK|1|DB|G|1401
6BOK|1|DB|4OC|1402
6BOK|1|DB|C|1403
6BOK|1|DB|5MC|1404
*
6BOK|1|DB|G|1497
6BOK|1|DB|UR3|1498
6BOK|1|DB|A|1499
6BOK|1|DB|A|1500
6BOK|1|DB|C|1501
Current chains
- Chain DB
- 16S ribosomal RNA
Nearby chains
- Chain EB
- Large subunit ribosomal RNA; LSU rRNA
- Chain HD
- Peptide chain release factor 1
- Chain KC
- mRNA
- Chain LC
- Small subunit ribosomal RNA fragment; SSU rRNA fragment
Coloring options: