IL_6BOK_378

3D structure

PDB id

6BOK (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

GGGAACCC*GGGGUGCCCCGCGAGGGGAGCCC

Length

31 nucleotides

Bulged bases

6BOK|1|DB|G|1002, 6BOK|1|DB|U|1025, 6BOK|1|DB|C|1027, 6BOK|1|DB|C|1028|||C, 6BOK|1|DB|G|1029

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOK|1|DB|G|1001
6BOK|1|DB|G|1002
6BOK|1|DB|G|1003
6BOK|1|DB|A|1004
6BOK|1|DB|A|1005
6BOK|1|DB|C|1006
6BOK|1|DB|C|1007
6BOK|1|DB|C|1008
*
6BOK|1|DB|G|1021
6BOK|1|DB|G|1022
6BOK|1|DB|G|1023
6BOK|1|DB|G|1024
6BOK|1|DB|U|1025
6BOK|1|DB|G|1026
6BOK|1|DB|C|1027
6BOK|1|DB|C|1028|||A
6BOK|1|DB|C|1028|||B
6BOK|1|DB|C|1028|||C
6BOK|1|DB|G|1029
6BOK|1|DB|C|1030
6BOK|1|DB|G|1031
6BOK|1|DB|A|1032|||A
6BOK|1|DB|G|1032|||B
6BOK|1|DB|G|1032|||C
6BOK|1|DB|G|1033
6BOK|1|DB|G|1034
6BOK|1|DB|A|1035
6BOK|1|DB|G|1036
6BOK|1|DB|C|1037
6BOK|1|DB|C|1038
6BOK|1|DB|C|1039

Current chains

Chain DB

16S ribosomal RNA

Nearby chains