IL_6BSI_001
3D structure
- PDB id
- 6BSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of HIV-1 RT complexed with an RNA/DNA hybrid containing the polypurine-tract sequence
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- CTTTTG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6BSI|1|D|DT|10, 6BSI|1|R|A|19
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BSI|1|D|DC|8
6BSI|1|D|DT|9
6BSI|1|D|DT|10
6BSI|1|D|DT|11
6BSI|1|D|DT|12
6BSI|1|D|DG|13
*
6BSI|1|R|C|17
6BSI|1|R|A|18
6BSI|1|R|A|19
6BSI|1|R|A|20
6BSI|1|R|A|21
6BSI|1|R|G|22
Current chains
- Chain D
- DNA (5'-D(*GP*TP*TP*TP*TP*TP*CP*TP*TP*TP*TP*GP*TP*TP*AP*TP*TP*GP*TP*GP*GP*CP*C)-3')
- Chain R
- RNA (25-MER)
Nearby chains
- Chain A
- REVERSE TRANSCRIPTASE P66 SUBUNIT
- Chain B
- REVERSE TRANSCRIPTASE P51 SUBUNIT
Coloring options: