IL_6BU8_039

3D structure

PDB id

6BU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with S1 domains 1 and 2 (Class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6BU8|1|01|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BU8|1|01|C|1043
6BU8|1|01|C|1044
6BU8|1|01|C|1045
6BU8|1|01|A|1046
6BU8|1|01|G|1047
6BU8|1|01|A|1048
6BU8|1|01|C|1049
6BU8|1|01|A|1050
6BU8|1|01|G|1051
6BU8|1|01|C|1052
*
6BU8|1|01|G|1107
6BU8|1|01|U|1108
6BU8|1|01|C|1109
6BU8|1|01|G|1110
6BU8|1|01|A|1111
6BU8|1|01|G|1112

Current chains

Chain 01

23S ribosomal RNA

Nearby chains

Chain 08

50S ribosomal protein L6

Chain 10

50S ribosomal protein L10

Chain 34

50S ribosomal protein L36