IL_6BU8_072
3D structure
- PDB id
- 6BU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with S1 domains 1 and 2 (Class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BU8_072 not in the Motif Atlas
- Geometric match to IL_4WF9_076
- Geometric discrepancy: 0.1265
- The information below is about IL_4WF9_076
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- No text annotation
- Motif group
- IL_22551.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
6BU8|1|01|G|1933
6BU8|1|01|C|1934
*
6BU8|1|01|G|1964
6BU8|1|01|C|1965
6BU8|1|01|A|1966
6BU8|1|01|C|1967
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain W
- Transfer RNA; tRNA
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