IL_6BU8_102
3D structure
- PDB id
- 6BU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with S1 domains 1 and 2 (Class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAAG*CGUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BU8_102 not in the Motif Atlas
- Geometric match to IL_5J7L_351
- Geometric discrepancy: 0.1659
- The information below is about IL_5J7L_351
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29471.1
- Basepair signature
- cWW-cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6BU8|1|01|C|2806
6BU8|1|01|U|2807
6BU8|1|01|G|2808
6BU8|1|01|A|2809
6BU8|1|01|A|2810
6BU8|1|01|G|2811
*
6BU8|1|01|C|2889
6BU8|1|01|G|2890
6BU8|1|01|U|2891
6BU8|1|01|G|2892
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 05
- 50S ribosomal protein L3
- Chain 21
- 50S ribosomal protein L22
- Chain 30
- 50S ribosomal protein L32
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