IL_6BU8_177
3D structure
- PDB id
- 6BU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with S1 domains 1 and 2 (Class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 6BU8|1|01|U|846, 6BU8|1|01|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BU8_177 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.3494
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6BU8|1|01|A|844
6BU8|1|01|A|845
6BU8|1|01|U|846
6BU8|1|01|U|847
6BU8|1|01|C|848
*
6BU8|1|01|G|930
6BU8|1|01|U|931
6BU8|1|01|U|932
6BU8|1|01|A|933
6BU8|1|01|U|934
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 28
- 50S ribosomal protein L30
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