IL_6BU8_189

3D structure

PDB id

6BU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with S1 domains 1 and 2 (Class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6BU8|1|A|U|1030, 6BU8|1|A|G|1032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BU8|1|A|G|1003
6BU8|1|A|A|1004
6BU8|1|A|A|1005
6BU8|1|A|G|1006
*
6BU8|1|A|U|1023
6BU8|1|A|G|1024
6BU8|1|A|U|1025
6BU8|1|A|G|1026
6BU8|1|A|C|1027
6BU8|1|A|C|1028
6BU8|1|A|U|1029
6BU8|1|A|U|1030
6BU8|1|A|C|1031
6BU8|1|A|G|1032
6BU8|1|A|G|1033
6BU8|1|A|G|1034
6BU8|1|A|A|1035
6BU8|1|A|A|1036
6BU8|1|A|C|1037

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S14