IL_6BUW_008

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUACC*GAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BUW_008 not in the Motif Atlas

Homologous match to IL_4LFB_008

Geometric discrepancy: 0.1114

The information below is about IL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_60988.1

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

6BUW|1|QA|C|132
6BUW|1|QA|U|133
6BUW|1|QA|A|134
6BUW|1|QA|C|135
6BUW|1|QA|C|136
*
6BUW|1|QA|G|227
6BUW|1|QA|A|228
6BUW|1|QA|U|229
6BUW|1|QA|G|230

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20