IL_6BUW_035

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

6BUW|1|QA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BUW_035 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.1086

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

6BUW|1|QA|G|922
6BUW|1|QA|A|923
*
6BUW|1|QA|U|1393
6BUW|1|QA|A|1394
6BUW|1|QA|C|1395

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QE

30S ribosomal protein S5