3D structure

PDB id
6BUW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.5 Å

Loop

Sequence
CGUAAAG*CG
Length
9 nucleotides
Bulged bases
6BUW|1|XA|A|572
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6BUW_194 not in the Motif Atlas
Homologous match to IL_5J7L_026
Geometric discrepancy: 0.0758
The information below is about IL_5J7L_026
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_38186.6
Basepair signature
cWW-L-cWW-L-L-R
Number of instances in this motif group
4

Unit IDs

6BUW|1|XA|C|569
6BUW|1|XA|G|570
6BUW|1|XA|U|571
6BUW|1|XA|A|572
6BUW|1|XA|A|573
6BUW|1|XA|A|574
6BUW|1|XA|G|575
*
6BUW|1|XA|C|880
6BUW|1|XA|G|881

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XE
30S ribosomal protein S5
Chain XH
30S ribosomal protein S8
Chain XL
30S ribosomal protein S12
Chain XQ
30S ribosomal protein S17

Coloring options:


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