IL_6BZ6_014

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CC*GUG

Length

5 nucleotides

Bulged bases

6BZ6|1|QA|U|347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_014 not in the Motif Atlas

Geometric match to IL_4V88_407

Geometric discrepancy: 0.3327

The information below is about IL_4V88_407

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_83039.19

Basepair signature

cWW-L-cWW

Number of instances in this motif group

123

Unit IDs

6BZ6|1|QA|C|341
6BZ6|1|QA|C|342
*
6BZ6|1|QA|G|346
6BZ6|1|QA|U|347
6BZ6|1|QA|G|348

Current chains

Chain QA

16S rRNA

Nearby chains

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19