IL_6BZ6_017

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

6BZ6|1|QA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6BZ6_017 not in the Motif Atlas

Geometric match to IL_6CZR_128

Geometric discrepancy: 0.1716

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

6BZ6|1|QA|U|375
6BZ6|1|QA|G|376
6BZ6|1|QA|G|377
*
6BZ6|1|QA|C|386
6BZ6|1|QA|U|387
6BZ6|1|QA|G|388
6BZ6|1|QA|A|389

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16